HL_4IOA_016
3D structure
- PDB id
- 4IOA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of compound 4e bound to large ribosomal subunit (50S) from Deinococcus radiodurans
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- CCUUAUGCG
- Length
- 9 nucleotides
- Bulged bases
- 4IOA|1|X|U|554, 4IOA|1|X|U|555, 4IOA|1|X|A|556
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_95685.1
- Basepair signature
- cWW-tSH-R
- Number of instances in this motif group
- 5
Unit IDs
4IOA|1|X|C|552
4IOA|1|X|C|553
4IOA|1|X|U|554
4IOA|1|X|U|555
4IOA|1|X|A|556
4IOA|1|X|U|557
4IOA|1|X|G|558
4IOA|1|X|C|559
4IOA|1|X|G|560
Current chains
- Chain X
- 23S ribosomal RNA
Nearby chains
- Chain G
- 50S ribosomal protein L13
- Chain N
- 50S ribosomal protein L20
- Chain O
- 50S ribosomal protein L21
Coloring options: