HL_4IOA_026
3D structure
- PDB id
- 4IOA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of compound 4e bound to large ribosomal subunit (50S) from Deinococcus radiodurans
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- AGCUAACU
- Length
- 8 nucleotides
- Bulged bases
- 4IOA|1|X|U|969, 4IOA|1|X|C|972
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_43074.13
- Basepair signature
- cWW-tSH-R-R
- Number of instances in this motif group
- 275
Unit IDs
4IOA|1|X|A|966
4IOA|1|X|G|967
4IOA|1|X|C|968
4IOA|1|X|U|969
4IOA|1|X|A|970
4IOA|1|X|A|971
4IOA|1|X|C|972
4IOA|1|X|U|973
Current chains
- Chain X
- 23S ribosomal RNA
Nearby chains
- Chain J
- 50S ribosomal protein L16
- Chain Y
- 5S ribosomal RNA; 5S rRNA
Coloring options: