HL_4IOA_033
3D structure
- PDB id
- 4IOA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of compound 4e bound to large ribosomal subunit (50S) from Deinococcus radiodurans
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- CGAACG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- GNRA related
- Broad Annotation
- GNRA related
- Motif group
- HL_43074.13
- Basepair signature
- cWW-tSH-R-R
- Number of instances in this motif group
- 275
Unit IDs
4IOA|1|X|C|1376
4IOA|1|X|G|1377
4IOA|1|X|A|1378
4IOA|1|X|A|1379
4IOA|1|X|C|1380
4IOA|1|X|G|1381
Current chains
- Chain X
- 23S ribosomal RNA
Nearby chains
- Chain 2
- 50S ribosomal protein L34
- Chain U
- 50S ribosomal protein L28
Coloring options: