HL_4IOA_059
3D structure
- PDB id
- 4IOA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of compound 4e bound to large ribosomal subunit (50S) from Deinococcus radiodurans
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- AGUCCAUAU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_36421.3
- Basepair signature
- cWW-tSH-R-R-R-R-R
- Number of instances in this motif group
- 6
Unit IDs
4IOA|1|X|A|2450
4IOA|1|X|G|2451
4IOA|1|X|U|2452
4IOA|1|X|C|2453
4IOA|1|X|C|2454
4IOA|1|X|A|2455
4IOA|1|X|U|2456
4IOA|1|X|A|2457
4IOA|1|X|U|2458
Current chains
- Chain X
- 23S ribosomal RNA
Nearby chains
- Chain 4
- 50S ribosomal protein L36
- Chain E
- 50S ribosomal protein L6
- Chain J
- 50S ribosomal protein L16
Coloring options: