3D structure

PDB id
4IOA (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of compound 4e bound to large ribosomal subunit (50S) from Deinococcus radiodurans
Experimental method
X-RAY DIFFRACTION
Resolution
3.2 Å

Loop

Sequence
CGUGAG
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
GNRA
Broad Annotation
No text annotation
Motif group
HL_43074.13
Basepair signature
cWW-tSH-R-R
Number of instances in this motif group
275

Unit IDs

4IOA|1|X|C|2573
4IOA|1|X|G|2574
4IOA|1|X|U|2575
4IOA|1|X|G|2576
4IOA|1|X|A|2577
4IOA|1|X|G|2578

Current chains

Chain X
23S ribosomal RNA

Nearby chains

Chain A
50S ribosomal protein L2

Coloring options:

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