HL_4IOA_073

3D structure

PDB id

4IOA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of compound 4e bound to large ribosomal subunit (50S) from Deinococcus radiodurans

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

GAAAAAUCACUUUC

Length

14 nucleotides

Bulged bases

4IOA|1|X|A|2191

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4IOA|1|X|G|2186
4IOA|1|X|A|2187
4IOA|1|X|A|2188
4IOA|1|X|A|2189
4IOA|1|X|A|2190
4IOA|1|X|A|2191
4IOA|1|X|U|2192
4IOA|1|X|C|2193
4IOA|1|X|A|2194
4IOA|1|X|C|2195
4IOA|1|X|U|2196
4IOA|1|X|U|2197
4IOA|1|X|U|2198
4IOA|1|X|C|2199

Current chains

Chain X

23S ribosomal RNA

Nearby chains

Chain A

50S ribosomal protein L2

Chain U

50S ribosomal protein L28