HL_4JI4_036
3D structure
- PDB id
- 4JI4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.69 Å
Loop
- Sequence
- GGGUGAAAGCCU
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4JI4_036 not in the Motif Atlas
- Homologous match to HL_5J7L_216
- Geometric discrepancy: 0.5241
- The information below is about HL_5J7L_216
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_78284.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
4JI4|1|A|G|1009
4JI4|1|A|G|1010
4JI4|1|A|G|1011
4JI4|1|A|U|1012
4JI4|1|A|G|1013
4JI4|1|A|A|1014
4JI4|1|A|A|1015
4JI4|1|A|A|1016
4JI4|1|A|G|1017
4JI4|1|A|C|1018
4JI4|1|A|C|1019
4JI4|1|A|U|1020
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain N
- RIBOSOMAL PROTEIN S14
- Chain S
- RIBOSOMAL PROTEIN S19
Coloring options: