HL_4JXX_001
3D structure
- PDB id
- 4JXX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of E coli E. coli glutaminyl-tRNA synthetase bound to tRNA(Gln)(CUG) and ATP from novel cryostabilization conditions
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.3 Å
Loop
- Sequence
- CAAGCGGUAAG
- Length
- 11 nucleotides
- Bulged bases
- 4JXX|1|B|C|916, 4JXX|1|B|G|918, 4JXX|1|B|G|919, 4JXX|1|B|U|920
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4JXX_001 not in the Motif Atlas
- Geometric match to HL_4JXZ_001
- Geometric discrepancy: 0.0924
- The information below is about HL_4JXZ_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_55043.2
- Basepair signature
- cWW-tSH-cWS-F
- Number of instances in this motif group
- 5
Unit IDs
4JXX|1|B|C|912
4JXX|1|B|A|913
4JXX|1|B|A|914
4JXX|1|B|G|915
4JXX|1|B|C|916
4JXX|1|B|G|918
4JXX|1|B|G|919
4JXX|1|B|U|920
4JXX|1|B|A|921
4JXX|1|B|A|922
4JXX|1|B|G|923
Current chains
- Chain B
- RNA (71-MER)
Nearby chains
- Chain A
- Glutamine--tRNA ligase
Coloring options: