HL_4K0K_033
3D structure
- PDB id
- 4K0K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 30S ribosomal subunit complexed with a serine-ASL and mRNA containing a stop codon
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- CCUUCGGG
- Length
- 8 nucleotides
- Bulged bases
- 4K0K|1|A|U|417, 4K0K|1|A|C|418
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4K0K_033 not in the Motif Atlas
- Geometric match to HL_5TBW_021
- Geometric discrepancy: 0.3461
- The information below is about HL_5TBW_021
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_56443.1
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
4K0K|1|A|C|414
4K0K|1|A|C|415
4K0K|1|A|U|416
4K0K|1|A|U|417
4K0K|1|A|C|418
4K0K|1|A|G|419
4K0K|1|A|G|420
4K0K|1|A|G|421
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain C
- 30S ribosomal protein S3
- Chain D
- 30S ribosomal protein S4
Coloring options: