HL_4KQY_006
3D structure
- PDB id
- 4KQY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bacillus subtilis yitJ S box/SAM-I riboswitch
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.02 Å
Loop
- Sequence
- CUCGAACAG
- Length
- 9 nucleotides
- Bulged bases
- 4KQY|1|A|A|101||||4_555
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_93727.4
- Basepair signature
- cWW-tSH-R-R-R-R
- Number of instances in this motif group
- 22
Unit IDs
4KQY|1|A|C|94||||4_555
4KQY|1|A|U|95||||4_555
4KQY|1|A|C|96||||4_555
4KQY|1|A|G|97||||4_555
4KQY|1|A|A|98||||4_555
4KQY|1|A|A|99||||4_555
4KQY|1|A|C|100||||4_555
4KQY|1|A|A|101||||4_555
4KQY|1|A|G|102||||4_555
Current chains
- Chain A
- YitJ S box/SAM-I riboswitch
Nearby chains
No other chains within 10ÅColoring options: