4KQY Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_4KQY_001 | 1/A/23:29 | Pseudoknot geometry HL_30680.2 | ||
| HL_4KQY_002 | 1/A/60:65 | GNRA HL_37824.3 | ||
| HL_4KQY_003 | 1/A/94:102 | GNRA wlth tandem sheared HL_81538.1 | ||
| HL_4KQY_004 | 1/A/23:29 | No text annotation | ||
| HL_4KQY_005 | 1/A/60:65 | GNRA | ||
| HL_4KQY_006 | 1/A/94:102 | No text annotation |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_4KQY_003 | 1/A/45:48, 1/A/77:79 | Major groove platform with extra pair IL_15698.2 | ||
| IL_4KQY_006 | 1/A/85:90, 1/A/106:109 | Pseudoknot IL_69145.3 | ||
| IL_4KQY_002 | 1/A/17:21, 1/A/31:38 | Kink-turn IL_70923.7 | ||
| IL_4KQY_004 | 1/A/49:50, 1/A/73:76 | Minor groove platform IL_09018.1 | ||
| IL_4KQY_005 | 1/A/52:56, 1/A/69:71 | No text annotation IL_47298.2 | ||
| IL_4KQY_007 | 1/A/17:21, 1/A/31:38 | Kink-turn | ||
| IL_4KQY_008 | 1/A/45:48, 1/A/77:79 | Major groove platform with extra pair | ||
| IL_4KQY_009 | 1/A/49:50, 1/A/73:76 | Minor groove platform | ||
| IL_4KQY_010 | 1/A/52:56, 1/A/69:71 | No text annotation | ||
| IL_4KQY_011 | 1/A/85:90, 1/A/106:109 | No text annotation |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_4KQY_001 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J4_4KQY_001 | 1/A/8:13, 1/A/42:43, 1/A/81:85, 1/A/109:110 | No text annotation | ||
| J4_4KQY_002 | 1/A/8:13, 1/A/42:43, 1/A/81:85, 1/A/109:110 | No text annotation |
Problematic loops
No problematic loops
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