HL_4KZX_007

3D structure

PDB id

4KZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 40S ribosomal subunit in complex with eIF1.

Experimental method

X-RAY DIFFRACTION

Resolution

7.81 Å

Loop

Sequence

CCUCCGUG

Length

8 nucleotides

Bulged bases

4KZX|1|i|U|314

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4KZX_007 not in the Motif Atlas

Geometric match to HL_5TBW_012

Geometric discrepancy: 0.3898

The information below is about HL_5TBW_012

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_13963.1

Basepair signature

cWW-F-F

Number of instances in this motif group

7

Unit IDs

4KZX|1|i|C|312
4KZX|1|i|C|313
4KZX|1|i|U|314
4KZX|1|i|C|315
4KZX|1|i|C|316
4KZX|1|i|G|317
4KZX|1|i|U|318
4KZX|1|i|G|319

Current chains

Chain i

18S ribosomal RNA

Nearby chains