HL_4KZY_004

3D structure

PDB id

4KZY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 40S ribosomal subunit in complex with eIF1 and eIF1A.

Experimental method

X-RAY DIFFRACTION

Resolution

7.01 Å

Loop

Sequence

CCUUUGUG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4KZY_004 not in the Motif Atlas

Geometric match to HL_2Y9H_005

Geometric discrepancy: 0.377

The information below is about HL_2Y9H_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_44506.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

4

Unit IDs

4KZY|1|i|C|194
4KZY|1|i|C|195
4KZY|1|i|U|196
4KZY|1|i|U|197
4KZY|1|i|U|198
4KZY|1|i|G|199
4KZY|1|i|U|200
4KZY|1|i|G|201

Current chains

Chain i

18S Ribosomal RNA

Nearby chains

Chain I

40S Ribosomal Protein S8