HL_4KZY_007

3D structure

PDB id

4KZY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 40S ribosomal subunit in complex with eIF1 and eIF1A.

Experimental method

X-RAY DIFFRACTION

Resolution

7.01 Å

Loop

Sequence

CCUCCGUG

Length

8 nucleotides

Bulged bases

4KZY|1|i|U|314

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4KZY_007 not in the Motif Atlas

Geometric match to HL_5TBW_012

Geometric discrepancy: 0.39

The information below is about HL_5TBW_012

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_13963.1

Basepair signature

cWW-F-F

Number of instances in this motif group

7

Unit IDs

4KZY|1|i|C|312
4KZY|1|i|C|313
4KZY|1|i|U|314
4KZY|1|i|C|315
4KZY|1|i|C|316
4KZY|1|i|G|317
4KZY|1|i|U|318
4KZY|1|i|G|319

Current chains

Chain i

18S Ribosomal RNA

Nearby chains

Chain G

40S Ribosomal Protein S6