HL_4KZZ_010
3D structure
- PDB id
- 4KZZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 40S ribosomal subunit in complex with mRNA, initiator tRNA and eIF1A
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 7.03 Å
Loop
- Sequence
- CCUGAGAAACGG
- Length
- 12 nucleotides
- Bulged bases
- 4KZZ|1|i|C|440, 4KZZ|1|i|G|441
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4KZZ_010 not in the Motif Atlas
- Homologous match to HL_4V88_195
- Geometric discrepancy: 0.1255
- The information below is about HL_4V88_195
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_06226.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
4KZZ|1|i|C|431
4KZZ|1|i|C|432
4KZZ|1|i|U|433
4KZZ|1|i|G|434
4KZZ|1|i|A|435
4KZZ|1|i|G|436
4KZZ|1|i|A|437
4KZZ|1|i|A|438
4KZZ|1|i|A|439
4KZZ|1|i|C|440
4KZZ|1|i|G|441
4KZZ|1|i|G|442
Current chains
- Chain i
- 18S Ribosomal RNA
Nearby chains
- Chain E
- 40S Ribosomal Protein S4X
- Chain G
- 40S Ribosomal Protein S6
- Chain I
- 40S Ribosomal Protein S8
- Chain Y
- 40S Ribosomal Protein S24
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