HL_4KZZ_020
3D structure
- PDB id
- 4KZZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 40S ribosomal subunit in complex with mRNA, initiator tRNA and eIF1A
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 7.03 Å
Loop
- Sequence
- AGGUGAAAUU
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4KZZ_020 not in the Motif Atlas
- Homologous match to HL_4V88_206
- Geometric discrepancy: 0.2259
- The information below is about HL_4V88_206
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.2
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 14
Unit IDs
4KZZ|1|i|A|953
4KZZ|1|i|G|954
4KZZ|1|i|G|955
4KZZ|1|i|U|956
4KZZ|1|i|G|957
4KZZ|1|i|A|958
4KZZ|1|i|A|959
4KZZ|1|i|A|960
4KZZ|1|i|U|961
4KZZ|1|i|U|962
Current chains
- Chain i
- 18S Ribosomal RNA
Nearby chains
- Chain F
- 40S Ribosomal Protein S5
- Chain O
- 40S Ribosomal Protein S14
- Chain k
- mRNA
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