HL_4KZZ_033
3D structure
- PDB id
- 4KZZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 40S ribosomal subunit in complex with mRNA, initiator tRNA and eIF1A
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 7.03 Å
Loop
- Sequence
- AUUGCAAUUAUU
- Length
- 12 nucleotides
- Bulged bases
- 4KZZ|1|i|U|1616, 4KZZ|1|i|U|1617, 4KZZ|1|i|A|1618
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4KZZ_033 not in the Motif Atlas
- Homologous match to HL_4V88_219
- Geometric discrepancy: 0.2378
- The information below is about HL_4V88_219
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_03273.1
- Basepair signature
- cWW-F-F-tWH-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
4KZZ|1|i|A|1609
4KZZ|1|i|U|1610
4KZZ|1|i|U|1611
4KZZ|1|i|G|1612
4KZZ|1|i|C|1613
4KZZ|1|i|A|1614
4KZZ|1|i|A|1615
4KZZ|1|i|U|1616
4KZZ|1|i|U|1617
4KZZ|1|i|A|1618
4KZZ|1|i|U|1619
4KZZ|1|i|U|1620
Current chains
- Chain i
- 18S Ribosomal RNA
Nearby chains
- Chain P
- 40S Ribosomal Protein S15
- Chain S
- 40S Ribosomal Protein S18
- Chain T
- 40S Ribosomal Protein S19
- Chain d
- 40S Ribosomal Protein S29
Coloring options: