HL_4L47_036

3D structure

PDB id

4L47 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.22 Å

Loop

Sequence

GUUCGG(1MG)GAC

Length

10 nucleotides

Bulged bases

4L47|1|QY|U|33

QA status

Modified nucleotides: 1MG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_92697.1

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

5

Unit IDs

4L47|1|QY|G|31
4L47|1|QY|U|32
4L47|1|QY|U|33
4L47|1|QY|C|34
4L47|1|QY|G|35
4L47|1|QY|G|36
4L47|1|QY|1MG|37
4L47|1|QY|G|37|||A
4L47|1|QY|A|38
4L47|1|QY|C|39

Current chains

Chain QY

messenger RNA

Nearby chains

Chain QA

Small subunit ribosomal RNA; SSU rRNA

Chain QL

30S ribosomal protein S12

Chain QM

30S ribosomal protein S13

Chain QX

A-site ASL SufA6

Chain RA

Large subunit ribosomal RNA; LSU rRNA