HL_4L47_060

3D structure

PDB id

4L47 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.22 Å

Loop

Sequence

UGAAAAG

Length

7 nucleotides

Bulged bases

4L47|1|RA|A|781, 4L47|1|RA|A|784

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4L47_060 not in the Motif Atlas

Homologous match to HL_7A0S_023

Geometric discrepancy: 0.1294

The information below is about HL_7A0S_023

Detailed Annotation

UNCG variation

Broad Annotation

UNCG variation

Motif group

HL_51020.2

Basepair signature

cWW-cSW-F

Number of instances in this motif group

14

Unit IDs

4L47|1|RA|U|779
4L47|1|RA|G|780
4L47|1|RA|A|781
4L47|1|RA|A|782
4L47|1|RA|A|783
4L47|1|RA|A|784
4L47|1|RA|G|785

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RD

50S ribosomal protein L2