HL_4L47_074

3D structure

PDB id

4L47 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.22 Å

Loop

Sequence

GCAAAUC

Length

7 nucleotides

Bulged bases

4L47|1|RA|C|1493, 4L47|1|RA|U|1497

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4L47_074 not in the Motif Atlas

Homologous match to HL_7RQB_038

Geometric discrepancy: 0.1828

The information below is about HL_7RQB_038

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_46680.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

27

Unit IDs

4L47|1|RA|G|1492
4L47|1|RA|C|1493
4L47|1|RA|A|1494
4L47|1|RA|A|1495
4L47|1|RA|A|1496
4L47|1|RA|U|1497
4L47|1|RA|C|1498

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RD

50S ribosomal protein L2