HL_4L47_117

3D structure

PDB id

4L47 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.22 Å

Loop

Sequence

UACGG

Length

5 nucleotides

Bulged bases

4L47|1|XA|A|344

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4L47_117 not in the Motif Atlas

Geometric match to HL_5TBW_022

Geometric discrepancy: 0.2939

The information below is about HL_5TBW_022

Detailed Annotation

Externally structured

Broad Annotation

Externally structured

Motif group

HL_96426.1

Basepair signature

cWW-F

Number of instances in this motif group

4

Unit IDs

4L47|1|XA|U|343
4L47|1|XA|A|344
4L47|1|XA|C|345
4L47|1|XA|G|346
4L47|1|XA|G|347

Current chains

Chain XA

16S rRNA

Nearby chains

Chain YO

50S ribosomal protein L14

Chain YT

50S ribosomal protein L19