HL_4L47_218

3D structure

PDB id

4L47 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.22 Å

Loop

Sequence

CCUACGGG

Length

8 nucleotides

Bulged bases

4L47|1|QA|A|344

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4L47_218 not in the Motif Atlas

Geometric match to HL_4V90_032

Geometric discrepancy: 0.3717

The information below is about HL_4V90_032

Detailed Annotation

tRNA D-loop

Broad Annotation

No text annotation

Motif group

HL_20811.4

Basepair signature

cWW-cWS-F

Number of instances in this motif group

14

Unit IDs

4L47|1|QA|C|341
4L47|1|QA|C|342
4L47|1|QA|U|343
4L47|1|QA|A|344
4L47|1|QA|C|345
4L47|1|QA|G|346
4L47|1|QA|G|347
4L47|1|QA|G|348

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QT

30S ribosomal protein S20

Chain RO

50S ribosomal protein L14

Chain RT

50S ribosomal protein L19