HL_4L71_154

3D structure

PDB id

4L71 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.9 Å

Loop

Sequence

UUGGGAAG

Length

8 nucleotides

Bulged bases

4L71|1|YA|A|311

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4L71_154 not in the Motif Atlas

Homologous match to HL_7RQB_010

Geometric discrepancy: 0.07

The information below is about HL_7RQB_010

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_41998.1

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

69

Unit IDs

4L71|1|YA|U|305
4L71|1|YA|U|306
4L71|1|YA|G|307
4L71|1|YA|G|308
4L71|1|YA|G|309
4L71|1|YA|A|310
4L71|1|YA|A|311
4L71|1|YA|G|312

Current chains

Chain YA

23S Ribosomal RNA

Nearby chains

Chain YY

50S ribosomal protein L24