HL_4L71_161

3D structure

PDB id

4L71 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.9 Å

Loop

Sequence

CGCAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4L71_161 not in the Motif Atlas

Geometric match to HL_5J7L_179

Geometric discrepancy: 0.3034

The information below is about HL_5J7L_179

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_04783.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

9

Unit IDs

4L71|1|YA|C|544
4L71|1|YA|G|545
4L71|1|YA|C|546
4L71|1|YA|A|547
4L71|1|YA|A|548
4L71|1|YA|G|549

Current chains

Chain YA

23S Ribosomal RNA

Nearby chains

Chain YN

50S ribosomal protein L13

Chain YV

50S ribosomal protein L21