3D structure

PDB id
4L71 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.9 Å

Loop

Sequence
CCUGCAAG
Length
8 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4L71_202 not in the Motif Atlas
Homologous match to HL_7RQB_057
Geometric discrepancy: 0.0983
The information below is about HL_7RQB_057
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_53619.1
Basepair signature
cWW-F-F
Number of instances in this motif group
11

Unit IDs

4L71|1|YA|C|2355
4L71|1|YA|C|2356
4L71|1|YA|U|2357
4L71|1|YA|G|2358
4L71|1|YA|C|2359
4L71|1|YA|A|2360
4L71|1|YA|A|2361
4L71|1|YA|G|2362

Current chains

Chain YA
23S Ribosomal RNA

Nearby chains

Chain Y0
50S ribosomal protein L27
Chain Y8
50S ribosomal protein L35
Chain YP
50S ribosomal protein L15

Coloring options:


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