HL_4L71_205

3D structure

PDB id

4L71 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.9 Å

Loop

Sequence

CGUCCACAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4L71_205 not in the Motif Atlas

Homologous match to HL_4WF9_056

Geometric discrepancy: 0.1627

The information below is about HL_4WF9_056

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_32735.2

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

4L71|1|YA|C|2471
4L71|1|YA|G|2472
4L71|1|YA|U|2473
4L71|1|YA|C|2474
4L71|1|YA|C|2475
4L71|1|YA|A|2476
4L71|1|YA|C|2477
4L71|1|YA|A|2478
4L71|1|YA|G|2479

Current chains

Chain YA

23S Ribosomal RNA

Nearby chains

Chain Y9

50S ribosomal protein L36

Chain YQ

50S ribosomal protein L16