3D structure

PDB id
4LEL (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.9 Å

Loop

Sequence
GUAACUAUAAC
Length
11 nucleotides
Bulged bases
4LEL|1|RA|A|1913
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4LEL_085 not in the Motif Atlas
Geometric match to HL_5TBW_049
Geometric discrepancy: 0.1698
The information below is about HL_5TBW_049
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_84702.1
Basepair signature
cWW-F-F-tHW-F-F-F-F
Number of instances in this motif group
4

Unit IDs

4LEL|1|RA|G|1910
4LEL|1|RA|U|1911
4LEL|1|RA|A|1912
4LEL|1|RA|A|1913
4LEL|1|RA|C|1914
4LEL|1|RA|U|1915
4LEL|1|RA|A|1916
4LEL|1|RA|U|1917
4LEL|1|RA|A|1918
4LEL|1|RA|A|1919
4LEL|1|RA|C|1920

Current chains

Chain RA
23S rRNA

Nearby chains

Chain QA
Small subunit ribosomal RNA; SSU rRNA
Chain QV
Transfer RNA; tRNA
Chain QX
A-site ASL SufA6
Chain QY
messenger RNA

Coloring options:


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