3D structure

PDB id
4LEL (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.9 Å

Loop

Sequence
CAGCCUGGUAG
Length
11 nucleotides
Bulged bases
4LEL|1|XV|C|16, 4LEL|1|XV|C|17, 4LEL|1|XV|U|17|||A, 4LEL|1|XV|G|18, 4LEL|1|XV|G|19, 4LEL|1|XV|U|20
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4LEL_141 not in the Motif Atlas
Homologous match to HL_4WT8_215
Geometric discrepancy: 0.3351
The information below is about HL_4WT8_215
Detailed Annotation
tRNA D-loop
Broad Annotation
No text annotation
Motif group
HL_93616.2
Basepair signature
cWW-cWS-F-F-F-F
Number of instances in this motif group
8

Unit IDs

4LEL|1|XV|C|13
4LEL|1|XV|A|14
4LEL|1|XV|G|15
4LEL|1|XV|C|16
4LEL|1|XV|C|17
4LEL|1|XV|U|17|||A
4LEL|1|XV|G|18
4LEL|1|XV|G|19
4LEL|1|XV|U|20
4LEL|1|XV|A|21
4LEL|1|XV|G|22

Current chains

Chain XV
P-site tRNA fMet

Nearby chains

Chain YA
Large subunit ribosomal RNA; LSU rRNA
Chain YG
50S ribosomal protein L5

Coloring options:


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