HL_4LEL_168

3D structure

PDB id

4LEL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.9 Å

Loop

Sequence

UGAAAAG

Length

7 nucleotides

Bulged bases

4LEL|1|YA|A|781, 4LEL|1|YA|A|784

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4LEL_168 not in the Motif Atlas

Geometric match to HL_2NUE_001

Geometric discrepancy: 0.3786

The information below is about HL_2NUE_001

Detailed Annotation

UNCG variation

Broad Annotation

UNCG variation

Motif group

HL_53890.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

15

Unit IDs

4LEL|1|YA|U|779
4LEL|1|YA|G|780
4LEL|1|YA|A|781
4LEL|1|YA|A|782
4LEL|1|YA|A|783
4LEL|1|YA|A|784
4LEL|1|YA|G|785

Current chains

Chain YA

23S rRNA

Nearby chains

Chain YD

50S ribosomal protein L2