HL_4LEL_206

3D structure

PDB id

4LEL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.9 Å

Loop

Sequence

UGAAGAAG

Length

8 nucleotides

Bulged bases

4LEL|1|YA|G|2529

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4LEL_206 not in the Motif Atlas

Homologous match to HL_5J7L_194

Geometric discrepancy: 0.1142

The information below is about HL_5J7L_194

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_31585.3

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

19

Unit IDs

4LEL|1|YA|U|2528
4LEL|1|YA|G|2529
4LEL|1|YA|A|2530
4LEL|1|YA|A|2531
4LEL|1|YA|G|2532
4LEL|1|YA|A|2533
4LEL|1|YA|A|2534
4LEL|1|YA|G|2535

Current chains

Chain YA

23S rRNA

Nearby chains

Chain Y9

50S ribosomal protein L36

Chain YH

50S ribosomal protein L6