HL_4LFB_017

3D structure

PDB id

4LFB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of 30S ribosomal subunit from Thermus thermophilus

Experimental method

X-RAY DIFFRACTION

Resolution

3.01 Å

Loop

Sequence

GAUUAGAUACC

Length

11 nucleotides

Bulged bases (A, C, G, U)

793U

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_12326.2

Basepair signature

cWW-F-F-tSH-F-F

Number of instances in this motif group

10

Unit IDs

4LFB|1|A|G|786
4LFB|1|A|A|787
4LFB|1|A|U|788
4LFB|1|A|U|789
4LFB|1|A|A|790
4LFB|1|A|G|791
4LFB|1|A|A|792
4LFB|1|A|U|793
4LFB|1|A|A|794
4LFB|1|A|C|795
4LFB|1|A|C|796

Current chains

Chain A

16S rRNA

Nearby chains

Chain K

ribosomal protein S11