HL_4LFZ_019

3D structure

PDB id

4LFZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of Paromomycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.92 Å

Loop

Sequence

CUAACG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4LFZ_019 not in the Motif Atlas

Homologous match to HL_5J7L_019

Geometric discrepancy: 0.1794

The information below is about HL_5J7L_019

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

4LFZ|1|QA|C|862
4LFZ|1|QA|U|863
4LFZ|1|QA|A|864
4LFZ|1|QA|A|865
4LFZ|1|QA|C|866
4LFZ|1|QA|G|867

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QE

30S ribosomal protein S5

Chain QH

30S ribosomal protein S8