HL_4LFZ_099

3D structure

PDB id

4LFZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of Paromomycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.92 Å

Loop

Sequence

CUGUUCG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4LFZ_099 not in the Motif Atlas

Homologous match to HL_4WF9_058

Geometric discrepancy: 0.1524

The information below is about HL_4WF9_058

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_30068.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

15

Unit IDs

4LFZ|1|RA|C|2551
4LFZ|1|RA|U|2552
4LFZ|1|RA|G|2553
4LFZ|1|RA|U|2554
4LFZ|1|RA|U|2555
4LFZ|1|RA|C|2556
4LFZ|1|RA|G|2557

Current chains

Chain RA

23S rRNA

Nearby chains

Chain Z6

tRNA acceptor end mimic