HL_4LFZ_149

3D structure

PDB id

4LFZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of Paromomycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.92 Å

Loop

Sequence

GCUUGC

Length

6 nucleotides

Bulged bases

4LFZ|1|YA|U|162

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4LFZ_149 not in the Motif Atlas

Geometric match to HL_8KAH_003

Geometric discrepancy: 0.3918

The information below is about HL_8KAH_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_89457.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

2

Unit IDs

4LFZ|1|YA|G|154
4LFZ|1|YA|C|155
4LFZ|1|YA|U|161
4LFZ|1|YA|U|162
4LFZ|1|YA|G|171
4LFZ|1|YA|C|172

Current chains

Chain YA

23S rRNA

Nearby chains

Chain Y1

50S ribosomal protein L28