Motif HL_89457.1 Version HL_89457.1 of this group appears in releases 3.89 to 3.90
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 1-5 | 2-4 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_8KAH_003 | 8KAH | 0.0000 | 2 | I | RNA (65-MER) | C | 86 | G | 87 | A | 88 | C | 91 | G | 92 | cWW | |
| 2 | HL_7MDL_001 | 7MDL | 0.4447 | 3 | E | RNA (90-MER) | A | 14||A | G | 15||A | U | 16||A | C | 20||A|A | U | 21||A | cWW | ncWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CGAGUCG | 1 |
| AGUGGUCU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GAGUC | 1 |
| GUGGUC | 1 |
- Annotations
-
- (2)
- Basepair signature
- cWW-F-F-F
- Heat map statistics
- Min 0.44 | Avg 0.22 | Max 0.44
Coloring options: