HL_4LFZ_231
3D structure
- PDB id
- 4LFZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of Paromomycin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.92 Å
Loop
- Sequence
- GUUUACCAAAAAC
- Length
- 13 nucleotides
- Bulged bases
- 4LFZ|1|YA|A|1780, 4LFZ|1|YA|C|1781, 4LFZ|1|YA|C|1782, 4LFZ|1|YA|A|1786
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4LFZ_231 not in the Motif Atlas
- Homologous match to HL_7A0S_045
- Geometric discrepancy: 0.1758
- The information below is about HL_7A0S_045
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50951.1
- Basepair signature
- cWW-F-F-tWH-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
4LFZ|1|YA|G|1776
4LFZ|1|YA|U|1777
4LFZ|1|YA|U|1778
4LFZ|1|YA|U|1779
4LFZ|1|YA|A|1780
4LFZ|1|YA|C|1781
4LFZ|1|YA|C|1782
4LFZ|1|YA|A|1783
4LFZ|1|YA|A|1784
4LFZ|1|YA|A|1785
4LFZ|1|YA|A|1786
4LFZ|1|YA|A|1787
4LFZ|1|YA|C|1788
Current chains
- Chain YA
- 23S rRNA
Nearby chains
- Chain Y7
- 50S ribosomal protein L34
- Chain YD
- 50S ribosomal protein L2
- Chain YW
- 50S ribosomal protein L22
Coloring options: