HL_7A0S_045

3D structure

PDB id

7A0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S Deinococcus radiodurans ribosome bounded with mycinamicin I

Experimental method

X-RAY DIFFRACTION

Resolution

3.22 Å

Loop

Sequence

GUUUACCAAAAUC

Length

13 nucleotides

Bulged bases

7A0S|1|X|A|1771, 7A0S|1|X|C|1772, 7A0S|1|X|C|1773, 7A0S|1|X|A|1777

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_03273.2

Basepair signature

cWW-F-F-tWH-F-F-F

Number of instances in this motif group

3

Unit IDs

7A0S|1|X|G|1767
7A0S|1|X|U|1768
7A0S|1|X|U|1769
7A0S|1|X|U|1770
7A0S|1|X|A|1771
7A0S|1|X|C|1772
7A0S|1|X|C|1773
7A0S|1|X|A|1774
7A0S|1|X|A|1775
7A0S|1|X|A|1776
7A0S|1|X|A|1777
7A0S|1|X|U|1778
7A0S|1|X|C|1779

Current chains

Chain X

RNA (2732-MER)

Nearby chains

Chain 2

50S ribosomal protein L34

Chain A

50S ribosomal protein L2