HL_4LNT_091

3D structure

PDB id

4LNT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

2.94 Å

Loop

Sequence

CUAAAAGGUAACG

Length

13 nucleotides

Bulged bases

4LNT|1|RA|A|2268, 4LNT|1|RA|C|2275

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4LNT_091 not in the Motif Atlas

Homologous match to HL_7RQB_054

Geometric discrepancy: 0.0566

The information below is about HL_7RQB_054

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19870.6

Basepair signature

cWW-tSH-tHH-tWW-F-F-F

Number of instances in this motif group

7

Unit IDs

4LNT|1|RA|C|2264
4LNT|1|RA|U|2265
4LNT|1|RA|A|2266
4LNT|1|RA|A|2267
4LNT|1|RA|A|2268
4LNT|1|RA|A|2269
4LNT|1|RA|G|2270
4LNT|1|RA|G|2271
4LNT|1|RA|U|2272
4LNT|1|RA|A|2273
4LNT|1|RA|A|2274
4LNT|1|RA|C|2275
4LNT|1|RA|G|2276

Current chains

Chain RA

23S rRNA

Nearby chains

Chain R0

50S ribosomal protein L27

Chain RQ

50S ribosomal protein L16