3D structure

PDB id
4LNT (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
2.94 Å

Loop

Sequence
AGAAAU
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4LNT_151 not in the Motif Atlas
Homologous match to HL_7RQB_007
Geometric discrepancy: 0.2355
The information below is about HL_7RQB_007
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_02862.2
Basepair signature
cWW-F-F-F
Number of instances in this motif group
6

Unit IDs

4LNT|1|YA|A|225
4LNT|1|YA|G|226
4LNT|1|YA|A|227
4LNT|1|YA|A|228
4LNT|1|YA|A|229
4LNT|1|YA|U|230

Current chains

Chain YA
23S rRNA

Nearby chains

Chain YP
50S ribosomal protein L15

Coloring options:


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