HL_4LNT_165

3D structure

PDB id

4LNT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

2.94 Å

Loop

Sequence

CGAACAG

Length

7 nucleotides

Bulged bases

4LNT|1|YA|C|645

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4LNT_165 not in the Motif Atlas

Homologous match to HL_4WF9_021

Geometric discrepancy: 0.2873

The information below is about HL_4WF9_021

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.6

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

4LNT|1|YA|C|641
4LNT|1|YA|G|642
4LNT|1|YA|A|643
4LNT|1|YA|A|644
4LNT|1|YA|C|645
4LNT|1|YA|A|646
4LNT|1|YA|G|647

Current chains

Chain YA

23S rRNA

Nearby chains

Chain Y6

50S ribosomal protein L33

Chain Y8

50S ribosomal protein L35

Chain YP

50S ribosomal protein L15