3D structure

PDB id
4LNT (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
2.94 Å

Loop

Sequence
CGGCAACG
Length
8 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4LNT_225 not in the Motif Atlas
Geometric match to HL_3RG5_006
Geometric discrepancy: 0.2742
The information below is about HL_3RG5_006
Detailed Annotation
tRNA anticodon loop
Broad Annotation
tRNA anticodon loop
Motif group
HL_04259.3
Basepair signature
cWW-F-F-F-F-F-F
Number of instances in this motif group
7

Unit IDs

4LNT|1|XA|C|1264
4LNT|1|XA|G|1265
4LNT|1|XA|G|1266
4LNT|1|XA|C|1267
4LNT|1|XA|A|1268
4LNT|1|XA|A|1269
4LNT|1|XA|C|1270
4LNT|1|XA|G|1271

Current chains

Chain XA
16S rRNA

Nearby chains

Chain XM
30S ribosomal protein S13
Chain XS
30S ribosomal protein S19
Chain XU
30S ribosomal protein S21

Coloring options:


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