3D structure

PDB id
4LNT (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
2.94 Å

Loop

Sequence
GACGGAAAU
Length
9 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4LNT_230 not in the Motif Atlas
Homologous match to HL_5J7L_219
Geometric discrepancy: 0.2663
The information below is about HL_5J7L_219
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_50860.2
Basepair signature
cWW-F-cWH-F-F-F-F
Number of instances in this motif group
6

Unit IDs

4LNT|1|RA|G|2304
4LNT|1|RA|A|2305
4LNT|1|RA|C|2306
4LNT|1|RA|G|2307
4LNT|1|RA|G|2308
4LNT|1|RA|A|2309
4LNT|1|RA|A|2310
4LNT|1|RA|A|2311
4LNT|1|RA|U|2312

Current chains

Chain RA
23S rRNA

Nearby chains

Chain RG
50S ribosomal protein L5

Coloring options:


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