HL_4LSK_053

3D structure

PDB id

4LSK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.48 Å

Loop

Sequence

CGCAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4LSK_053 not in the Motif Atlas

Geometric match to HL_5J7L_179

Geometric discrepancy: 0.233

The information below is about HL_5J7L_179

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_04783.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

9

Unit IDs

4LSK|1|RA|C|544
4LSK|1|RA|G|545
4LSK|1|RA|C|546
4LSK|1|RA|A|547
4LSK|1|RA|A|548
4LSK|1|RA|G|549

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RN

50S ribosomal protein L13

Chain RV

50S ribosomal protein L21