HL_4LSK_173

3D structure

PDB id

4LSK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.48 Å

Loop

Sequence

CUUAGAAGCAG

Length

11 nucleotides

Bulged bases

4LSK|1|YA|U|1066, 4LSK|1|YA|A|1070

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4LSK_173 not in the Motif Atlas

Homologous match to HL_6PRV_001

Geometric discrepancy: 0.3785

The information below is about HL_6PRV_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19210.3

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

4LSK|1|YA|C|1064
4LSK|1|YA|U|1065
4LSK|1|YA|U|1066
4LSK|1|YA|A|1067
4LSK|1|YA|G|1068
4LSK|1|YA|A|1069
4LSK|1|YA|A|1070
4LSK|1|YA|G|1071
4LSK|1|YA|C|1072
4LSK|1|YA|A|1073
4LSK|1|YA|G|1074

Current chains

Chain YA

23S rRNA

Nearby chains