HL_4LSK_174

3D structure

PDB id

4LSK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.48 Å

Loop

Sequence

CGUAAUAG

Length

8 nucleotides

Bulged bases

4LSK|1|YA|A|1096

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4LSK_174 not in the Motif Atlas

Homologous match to HL_6PRV_002

Geometric discrepancy: 0.5983

The information below is about HL_6PRV_002

Detailed Annotation

GNRA wlth tandem sheared

Broad Annotation

No text annotation

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

4LSK|1|YA|C|1092
4LSK|1|YA|G|1093
4LSK|1|YA|U|1094
4LSK|1|YA|A|1095
4LSK|1|YA|A|1096
4LSK|1|YA|U|1097
4LSK|1|YA|A|1098
4LSK|1|YA|G|1099

Current chains

Chain YA

23S rRNA

Nearby chains

Chain Y9

50S ribosomal protein L36

Chain YH

50S ribosomal protein L6