HL_4LSK_224

3D structure

PDB id

4LSK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.48 Å

Loop

Sequence

CCUACGGG

Length

8 nucleotides

Bulged bases

4LSK|1|XA|A|344

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4LSK_224 not in the Motif Atlas

Geometric match to HL_4V90_032

Geometric discrepancy: 0.3944

The information below is about HL_4V90_032

Detailed Annotation

tRNA D-loop

Broad Annotation

No text annotation

Motif group

HL_20811.4

Basepair signature

cWW-cWS-F

Number of instances in this motif group

14

Unit IDs

4LSK|1|XA|C|341
4LSK|1|XA|C|342
4LSK|1|XA|U|343
4LSK|1|XA|A|344
4LSK|1|XA|C|345
4LSK|1|XA|G|346
4LSK|1|XA|G|347
4LSK|1|XA|G|348

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XT

30S ribosomal protein S20

Chain YO

50S ribosomal protein L14

Chain YT

50S ribosomal protein L19