HL_4M2Z_002

3D structure

PDB id

4M2Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of RNASE III complexed with double-stranded RNA and CMP (TYPE II CLEAVAGE)

Experimental method

X-RAY DIFFRACTION

Resolution

2.85 Å

Loop

Sequence

CGCAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4M2Z_002 not in the Motif Atlas

Geometric match to HL_5TBW_066

Geometric discrepancy: 0.1338

The information below is about HL_5TBW_066

Detailed Annotation

Ribsomal LSU H95

Broad Annotation

Ribsomal LSU H95

Motif group

HL_65794.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

11

Unit IDs

4M2Z|1|D|C|11
4M2Z|1|D|G|12
4M2Z|1|D|C|13
4M2Z|1|D|A|14
4M2Z|1|D|A|15
4M2Z|1|D|G|16

Current chains

Chain D

RNA10

Nearby chains

Chain A

Ribonuclease 3

Chain B

Ribonuclease 3