HL_4P3E_001
3D structure
- PDB id
- 4P3E (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human SRP S domain
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.5 Å
Loop
- Sequence
- GGGAGC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4P3E_001 not in the Motif Atlas
- Homologous match to HL_1MFQ_001
- Geometric discrepancy: 0.1178
- The information below is about HL_1MFQ_001
- Detailed Annotation
- GNRA variation
- Broad Annotation
- GNRA variation
- Motif group
- HL_34789.5
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 428
Unit IDs
4P3E|1|A|G|146
4P3E|1|A|G|147
4P3E|1|A|G|148
4P3E|1|A|A|149
4P3E|1|A|G|150
4P3E|1|A|C|151
Current chains
- Chain A
- SRP RNA (124-mer)
Nearby chains
- Chain B
- Signal recognition particle 19 kDa protein
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