HL_4P5J_002
3D structure
- PDB id
- 4P5J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the tRNA-like structure from Turnip Yellow Mosaic Virus (TYMV), a tRNA mimicking RNA
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 1.99 Å
Loop
- Sequence
- CUCGACACG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- Anticodon loop related
- Broad Annotation
- TLS RNA anticodon loop
- Motif group
- HL_06059.1
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 51
Unit IDs
4P5J|1|A|C|25
4P5J|1|A|U|26
4P5J|1|A|C|27
4P5J|1|A|G|28
4P5J|1|A|A|29
4P5J|1|A|C|30
4P5J|1|A|A|31
4P5J|1|A|C|32
4P5J|1|A|G|33
Current chains
- Chain A
- Turnip yellow mosaic virus mRNA for the coat protein
Nearby chains
No other chains within 10ÅColoring options: