Motif HL_32152.1 Version HL_32152.1 of this group appears in releases 4.1 to 4.1
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 1-8 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_3PDR_003 | 3PDR | 0.0000 | 2 | X | M-box riboswitch (ykoK leader) | G | 127 | A | 128 | C | 131 | U | 132 | U | 133 | G | 134 | U | 135 | C | 136 | cWW | |
| 2 | HL_4P5J_002 | 4P5J | 0.5327 | 1 | Anticodon loop related | A | tRNA-like 3' UTR element | C | 25 | U | 26 | G | 28 | A | 29 | C | 30 | A | 31 | C | 32 | G | 33 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAUGCUUGUC | 1 |
| CUCGACACG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AUGCUUGU | 1 |
| UCGACAC | 1 |
Release history
| Release | 4.1 |
|---|---|
| Date | 2025-09-10 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Anticodon loop related (1)
- Basepair signature
- cWW-F-F-F-F-F-F
- Heat map statistics
- Min 0.53 | Avg 0.27 | Max 0.53
Coloring options: